Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954995.1_cds_XP_016493678.1_83756
CDS Infomation

[gene=LOC107812993] [db_xref=GeneID:107812993] [protein=TMV resistance protein N-like isoform X2] [protein_id=XP_016493678.1] [location=join(27283..27782,28524..29610,31380..31775)] [gbkey=CDS]
Sequence

ATGGCATTATCTTCTGCTTCTACAACTACTTCACAGTTTCGGTGGAACTACAAAGTCTTT
CTAAGCTTTAGAGGTAAAGATACTCGAAGCAAATTTACAAGTCACCTCTTCAAAGGCTTG
GAAAGCAGTGGAATATTCACGTTTCAAGATGATAAAAGGCTAGAGCATGGTGCATCAATA
TCAGATGAACTCCTGAAAGCTATCGAACAGTCTCAAGTTGCCCTTGTCGTTTTCTCACAG
AATTATGCAACATCGAGGTGGTGCTTAGATGAGTTAGTAAAGATCATGGAATGCAAGGCT
CAATGTGGACATACTGTCATACCAGTCTTCTATGATGTGGATCCAGCACATGTTCGATAC
CAGAGGAAGAGCTTTGCCAAAGCCTTTAAGAAACACGAAACAAGATATAAGGATGATGAT
GAAGGAATGCAGAAGGTCCAAAGATGGAGGAATGCTCTAACTGCTGCTGCAAATCTAAAA
GGATATGATATCCGTGCCGGGATTGAGGCAGAGAATATTCAGCACATTGTCGACCAAATT
TCCAAATTGTGCAATAGTGCTAGTTTATCTTCTTTGCGAGATGTTGTCGGGATAGATACT
CATCTGGAGAAATTAAAGTCCCTACTTAAGGTAGGAACCAATGATGTTCGGATCATATTG
GGGATCTGGGGCATGGGGGGTCTAGGGAAGACGACAATAGCAAGAGCCATTTTTGACACT
TTATCTCATCAATTTGAAGCTGTTTGTTTCCTTGCGGATATTAAAGAAAATGAAAAAAGA
CATCAACTGTATTCTTTGCAAAACACCCTTCTCTCTGAATTGTTAAGAAGAAAAGATGAT
TACGTCAATAATAAGCATGATGGGAAGCGGATGATTCCGGATAGACTTTGCTCTAAGAAG
GTGCTAATTGTGCTTGATGATATAGATCATAAAGATCATTTAGAGTATTTAGCGGGTGAT
ATTGGTTGGTTTGATAATGGCAGTAGAGTTGTTGTCACAACTAGAAACAAGCATTTGATA
GAGAAGAATGATGTCATTTATGAAGTGACTGGACTAGCTGACCATGAAGCTATGCAGTTA
TTCAGTCAACATGCTTTCAGAAAAGAAGATCCAGATGAGTGTTTTAAGGAGCTCTCATTG
GAGGTAGTAAATTATGCTAAAGGTCTTCCTTTAGCCCTCAAAGTGTGGGGTTCTTTGCTG
CATAACTTAGGCTTAACTGAATGGAAAAGTGCTATAAAGCACATGAAAATTAATTCTAAT
TCGGAAATTGTTGAAAAGCTCAAAATCAGTTATGACGGATTGGAGCCCATCCACCAAGAG
ATGTTTCTAGATATAGCATGCTTCTTGCGAGGGGAAAAAAACGATTACGCCGTGCAAATT
CTTGAGAGTTGTCATTCTGGAGTTGAATACGGATTGCGTATTTTAATTGACAAATCCCTT
GTGTCTATCTCTGAAAATGATCGAATTCAAATGCATGACTTAATACATGATATGGGTAAA
TATATAGTGAATTTTAAAAAAGATCCTGGAGAACGTAGCAGGCTATGGCTCGCCGAGGAA
GTCGAAGAAGTGATGAGCAACAATGCACAATTGTCGTCTCTACGGACGCTAGATCTCAGA
TACTCTAAAAGCTTGGTGCGAACACCAGATTTCACGGGGATGCCAAATTTGGAGTATTTG
GATCTGTTTTGGTGTTATAATCTTGAAGAGGTTCACCATTCCCTGGGATGTTGCAGCAAA
CTCATTTGGTTAGATTTGAGTTGGTGTCAAAGCCTTAAGAGATTTCCATGTGTTAGCGTG
GATTCTCTTGAATATCTGAGTTTAGATGGTTGCTTTAGGTTAGAGAAATTTCCAGAAATC
CACGGGAGAATGAAGCCGGAGATACATATTCGCATGGGAGCCTCTGGGATAAGGGAAATA
CCATCATCTATTTTTCAGTACCAGACTCATATTACCAAGCTAGATTTCAGCGGTATGAGA
TGA

Peptide Sequence

PEP ID

XP_016493678.1
PEP Infomation

PREDICTED: TMV resistance protein N-like isoform X2 [Nicotiana tabacum]
Sequence

MALSSASTTTSQFRWNYKVFLSFRGKDTRSKFTSHLFKGLESSGIFTFQDDKRLEHGASI
SDELLKAIEQSQVALVVFSQNYATSRWCLDELVKIMECKAQCGHTVIPVFYDVDPAHVRY
QRKSFAKAFKKHETRYKDDDEGMQKVQRWRNALTAAANLKGYDIRAGIEAENIQHIVDQI
SKLCNSASLSSLRDVVGIDTHLEKLKSLLKVGTNDVRIILGIWGMGGLGKTTIARAIFDT
LSHQFEAVCFLADIKENEKRHQLYSLQNTLLSELLRRKDDYVNNKHDGKRMIPDRLCSKK
VLIVLDDIDHKDHLEYLAGDIGWFDNGSRVVVTTRNKHLIEKNDVIYEVTGLADHEAMQL
FSQHAFRKEDPDECFKELSLEVVNYAKGLPLALKVWGSLLHNLGLTEWKSAIKHMKINSN
SEIVEKLKISYDGLEPIHQEMFLDIACFLRGEKNDYAVQILESCHSGVEYGLRILIDKSL
VSISENDRIQMHDLIHDMGKYIVNFKKDPGERSRLWLAEEVEEVMSNNAQLSSLRTLDLR
YSKSLVRTPDFTGMPNLEYLDLFWCYNLEEVHHSLGCCSKLIWLDLSWCQSLKRFPCVSV
DSLEYLSLDGCFRLEKFPEIHGRMKPEIHIRMGASGIREIPSSIFQYQTHITKLDFSGMR

Transcript Sequence

Gene sequence data has not been registered.